Please insert a variant description using the HGVS format.
0 Errors, 0 Warnings.
Raw variant 1: substitution at 2019
CAGACCAGCAACTTGTTGAATGCCA G TTTTGACCACAGAAGAATATTCGAG
CAGACCAGCAACTTGTTGAATGCCA C TTTTGACCACAGAAGAATATTCGAG
View original variant in UCSC Genome Browser
(Not for use in LSDBs in case of protein-coding transcripts).
NM_032725.3(BUD13_i001):p.(=)
1 MAAAPPLSKA EYLKRYLSGA DAGVDRGSES GRKRRKKRPK PGGAGGKGMR IVDDDVSWTA
61 ISTTKLEKEE EEDDGDLPVV AEFVDERPEE VKQMEAFRSS AKWKLLGGHN EDLPSNRHFR
121 HDTPDSSPRR VRHGTPDPSP RKDRHDTPDP SPRRARHDTP DPSPLRGARH DSDTSPPRRI
181 RHDSSDTSPP RRARHDSPDP SPPRRPQHNS SGASPRRVRH DSPDPSPPRR ARHGSSDISS
241 PRRVHNNSPD TSRRTLGSSD TQQLRRARHD SPDLAPNVTY SLPRTKSGKA PERASSKTSP
301 HWKESGASHL SFPKNSKYEY DPDISPPRKK QAKSHFGDKK QLDSKGDCQK ATDSDLSSPR
361 HKQSPGHQDS DSDLSPPRNR PRHRSSDSDL SPPRRRQRTK SSDSDLSPPR RSQPPGKKAA
421 HMYSGAKTGL VLTDIQREQQ ELKEQDQETM AFEAEFQYAE TVFRDKSGRK RNLKLERLEQ
481 RRKAEKDSER DELYAQWGKG LAQSRQQQQN VEDAMKEMQK PLARYIDDED LDRMLREQER
541 EGDPMANFIK KNKAKENKNK KVRPRYSGPA PPPNRFNIWP GYRWDGVDRS NGFEQKRFAR
601 LASKKAVEEL AYKWSVEDM*
No change: predicted protein (not shown) equals reference protein.
Raw variant | Created | Deleted |
---|---|---|
1 | BsrI |
Genomic description: 2019G>C
Number | Start (g.) | Stop (g.) | Start (c.) | Stop (c.) |
---|---|---|---|---|
1 | 1 | 177 | -34 | 143 |
2 | 178 | 271 | 144 | 237 |
3 | 272 | 356 | 238 | 322 |
4 | 357 | 1070 | 323 | 1036 |
5 | 1071 | 1288 | 1037 | 1254 |
6 | 1289 | 1394 | 1255 | 1360 |
7 | 1395 | 1533 | 1361 | 1499 |
8 | 1534 | 1718 | 1500 | 1684 |
9 | 1719 | 1800 | 1685 | 1766 |
10 | 1801 | 2206 | 1767 | *312 |
g. | c. | |
---|---|---|
Start | 35 | 1 |
Stop | 1894 | 1860 |
Download this reference sequence file: NM_032725.3.gb
Name | ID | Locus tag | Product | Link method |
---|---|---|---|---|
BUD13_v001 | NM_032725.3 | exhaustion | ||
BUD13_i001 | NP_116114.1 | BUD13 homolog isoform 1 | exhaustion |
Link methods priorities order: protein (NCBI), locus tag, product tag, exhaustion, and construction.