Please insert a variant description using the HGVS format.
0 Errors, 0 Warnings.
Raw variant 1: substitution at 745
CGGGGTTGGGCCAAGATCTCCAACA T GACTTTTAGCAATGGAAAACTAATA
CGGGGTTGGGCCAAGATCTCCAACA A GACTTTTAGCAATGGAAAACTAATA
View original variant in UCSC Genome Browser
(Not for use in LSDBs in case of protein-coding transcripts).
NM_003701.3(TNFSF11_i001):p.(Met199Lys)
1 MRRASRDYTK YLRGSEEMGG GPGAPHEGPL HAPPPPAPHQ PPAASRSMFV ALLGLGLGQV
61 VCSVALFFYF RAQMDPNRIS EDGTHCIYRI LRLHENADFQ DTTLESQDTK LIPDSCRRIK
121 QAFQGAVQKE LQHIVGSQHI RAEKAMVDGS WLDLAKRSKL EAQPFAHLTI NATDIPSGSH
181 KVSLSSWYHD RGWAKISNMT FSNGKLIVNQ DGFYYLYANI CFRHHETSGD LATEYLQLMV
241 YVTKTSIKIP SSHTLMKGGS TKYWSGNSEF HFYSINVGGF FKLRSGEEIS IEVSNPSLLD
301 PDQDATYFGA FKVRDID*
1 MRRASRDYTK YLRGSEEMGG GPGAPHEGPL HAPPPPAPHQ PPAASRSMFV ALLGLGLGQV
61 VCSVALFFYF RAQMDPNRIS EDGTHCIYRI LRLHENADFQ DTTLESQDTK LIPDSCRRIK
121 QAFQGAVQKE LQHIVGSQHI RAEKAMVDGS WLDLAKRSKL EAQPFAHLTI NATDIPSGSH
181 KVSLSSWYHD RGWAKISNKT FSNGKLIVNQ DGFYYLYANI CFRHHETSGD LATEYLQLMV
241 YVTKTSIKIP SSHTLMKGGS TKYWSGNSEF HFYSINVGGF FKLRSGEEIS IEVSNPSLLD
301 PDQDATYFGA FKVRDID*
Raw variant | Created | Deleted |
---|---|---|
1 | CviAII, FatI, NlaIII |
Genomic description: 745T>A
Number | Start (g.) | Stop (g.) | Start (c.) | Stop (c.) |
---|---|---|---|---|
1 | 1 | 368 | -149 | 219 |
2 | 369 | 536 | 220 | 387 |
3 | 537 | 582 | 388 | 433 |
4 | 583 | 681 | 434 | 532 |
5 | 682 | 2198 | 533 | *1095 |
g. | c. | |
---|---|---|
Start | 150 | 1 |
Stop | 1103 | 954 |
Download this reference sequence file: NM_003701.3.gb
Name | ID | Locus tag | Product | Link method |
---|---|---|---|---|
TNFSF11_v001 | NM_003701.3 | exhaustion | ||
TNFSF11_i001 | NP_003692.1 | tumor necrosis factor ligand superfamily member 11 isoform 1 | exhaustion |
Link methods priorities order: protein (NCBI), locus tag, product tag, exhaustion, and construction.